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  5. Cre16.g683793

Cre16.g683793


Description : pescadillo-related


Gene families : OG_42_0005471 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre16.g683793
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
166421 No alias pescadillo-related 0.02 Orthogroups_2024-Update
A4A49_28233 No alias pescadillo-like protein 0.02 Orthogroups_2024-Update
At5g14520 No alias Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LYK7] 0.06 Orthogroups_2024-Update
Bradi1g11730 No alias pescadillo-related 0.04 Orthogroups_2024-Update
Brara.C00631.1 No alias component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.05 Orthogroups_2024-Update
GRMZM2G068471 No alias pescadillo-related 0.02 Orthogroups_2024-Update
Glyma.03G234900 No alias pescadillo-related 0.03 Orthogroups_2024-Update
Glyma.19G232500 No alias pescadillo-related 0.05 Orthogroups_2024-Update
Kfl00136_0090 kfl00136_0090_v1.1 (at5g14520 : 498.0) pescadillo-related; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Potri.004G121400 No alias pescadillo-related 0.03 Orthogroups_2024-Update
Pp1s47_85V6 No alias T15N1.10; pescadillo - like protein [Arabidopsis thaliana] 0.06 Orthogroups_2024-Update
evm.model.contig_2150.6 No alias (at5g14520 : 301.0) pescadillo-related; FUNCTIONS IN:... 0.13 Orthogroups_2024-Update
evm.model.tig00020961.62 No alias (at5g14520 : 240.0) pescadillo-related; FUNCTIONS IN:... 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEA InterProScan predictions
BP GO:0042254 ribosome biogenesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR010613 PES 7 263
No external refs found!