1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10162615g0010

MA_10162615g0010


Description : (at5g52450 : 418.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 836.0) & (original description: no original description)


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10162615g0010
Cluster HCCA clusters: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
Cre01.g014150 No alias MATE efflux family protein 0.01 Orthogroups_2024-Update
GRMZM2G161809 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Kfl00011_0410 kfl00011_0410_v1.... (at4g23030 : 294.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
PSME_00034046-RA No alias (at5g52450 : 344.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
Sobic.006G042200.1 No alias metabolite transporter *(DTX) 0.07 Orthogroups_2024-Update
evm.model.tig00000076.15 No alias (at5g52450 : 82.0) MATE efflux family protein; FUNCTIONS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 1 115
IPR002528 MATE_fam 176 340
No external refs found!