Solyc10g006450

Description : COBRA-like protein (AHRD V3.3 *** L0AUC5_POPTO)

Gene families : OG_42_0001403 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001403_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc10g006450
Cluster	HCCA clusters: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sobic.002G427400.1	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	Orthogroups_2024-Update
Solyc09g075540	No alias	Protein COBRA, putative (AHRD V3.3 *** B9RZK6_RICCO)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	InterProScan predictions
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	IEA	InterProScan predictions
BP	GO:0030198	extracellular matrix organization	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	IEA	InterProScan predictions
BP	GO:0040007	growth	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	242	421

External Links

No external refs found!