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  5. MA_10292745g0010

MA_10292745g0010


Description : (at5g20480 : 155.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (p93194|rpk1_iponi : 95.5) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 310.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10292745g0010
Cluster HCCA clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
At2g24130 No alias Leucine-rich receptor-like protein kinase family protein... 0.04 Orthogroups_2024-Update
Brara.C01494.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Brara.E02261.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
GRMZM2G012685 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G107180.5 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
HORVU6Hr1G003810.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
PSME_00014024-RA No alias (at2g24130 : 458.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00027031-RA No alias (at3g47570 : 470.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00040101-RA No alias (at2g24130 : 273.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00042436-RA No alias (at5g46330 : 119.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00043445-RA No alias (at5g46330 : 407.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00046894-RA No alias (at5g46330 : 162.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00047382-RA No alias (at2g24130 : 593.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00053750-RA No alias (at4g20140 : 428.0) Encodes GASSHO1 (GSO1), a putative... 0.03 Orthogroups_2024-Update
PSME_00054181-RA No alias (at2g24130 : 94.4) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00056030-RA No alias (at2g26330 : 241.0) Homologous to receptor protein... 0.03 Orthogroups_2024-Update
Potri.006G099100 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Potri.011G103000 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Seita.1G036300.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.5G106400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G118900.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.J030600.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.004G288200.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.005G057700.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.008G175032.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Solyc04g009640 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 122 138
IPR013210 LRR_N_plant-typ 49 89
No external refs found!