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  5. MA_10426142g0010

MA_10426142g0010


Description : (at5g10560 : 843.0) Glycosyl hydrolase family protein; FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT1G78060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 370.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (reliability: 1686.0) & (original description: no original description)


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10426142g0010
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
PSME_00042060-RA No alias (at5g64570 : 954.0) Encodes a beta-d-xylosidase that... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR026891 Fn3-like 750 818
IPR002772 Glyco_hydro_3_C 467 691
IPR001764 Glyco_hydro_3_N 115 385
No external refs found!