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  5. Solyc10g007310

Solyc10g007310


Description : LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT2G42610.2)


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g007310
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
At5g58500 No alias LSH5 [Source:UniProtKB/TrEMBL;Acc:A0A178U8N9] 0.03 Orthogroups_2024-Update
Brara.F02899.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G459645 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Glyma.08G078500 No alias Protein of unknown function (DUF640) 0.06 Orthogroups_2024-Update
Potri.004G057300 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Sobic.005G094266.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 49 170
No external refs found!