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  5. MA_10426200g0010

MA_10426200g0010


Description : (at1g55040 : 288.0) zinc finger (Ran-binding) family protein; FUNCTIONS IN: binding, zinc ion binding; LOCATED IN: nucleus; EXPRESSED IN: cultured cell, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.1); Has 22562 Blast hits to 12307 proteins in 1055 species: Archae - 52; Bacteria - 6108; Metazoa - 7873; Fungi - 2055; Plants - 2458; Viruses - 215; Other Eukaryotes - 3801 (source: NCBI BLink). & (reliability: 576.0) & (original description: no original description)


Gene families : OG_42_0001998 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001998_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10426200g0010
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
At1g70650 No alias Ran BP2/NZF zinc finger-like superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g11210 No alias Ran BP2/NZF zinc finger-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g11397 No alias Ran BP2/NZF zinc finger-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.F00420.1 No alias RNA editing factor *(OZ) 0.03 Orthogroups_2024-Update
Brara.G02989.1 No alias RNA editing factor *(OZ) 0.03 Orthogroups_2024-Update
Brara.I01697.1 No alias RNA editing factor *(OZ) 0.03 Orthogroups_2024-Update
Glyma.09G177100 No alias zinc finger (Ran-binding) family protein 0.02 Orthogroups_2024-Update
MA_140861g0010 No alias (at1g55040 : 210.0) zinc finger (Ran-binding) family... 0.04 Orthogroups_2024-Update
Potri.005G033000 No alias zinc finger (Ran-binding) family protein 0.03 Orthogroups_2024-Update
Seita.9G118800.1 No alias RNA editing factor *(OZ) 0.04 Orthogroups_2024-Update
Seita.9G121200.1 No alias RNA editing factor *(OZ) 0.03 Orthogroups_2024-Update
Solyc08g014510 No alias Zinc finger protein (AHRD V3.3 *** W9RXF5_9ROSA) 0.03 Orthogroups_2024-Update
Sopen08g005500 No alias Zn-finger in Ran binding protein and others 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 349 373
IPR001876 Znf_RanBP2 384 411
No external refs found!