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  5. MA_10426519g0010

MA_10426519g0010


Description : (at2g27100 : 677.0) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.; SERRATE (SE); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, nuclear speck, nucleolus, nucleus, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Arsenite-resistance protein 2 (InterPro:IPR007042), Protein of unknown function DUF3546 (InterPro:IPR021933), Zinc finger, C2H2-type (InterPro:IPR007087); Has 5797 Blast hits to 4596 proteins in 474 species: Archae - 2; Bacteria - 583; Metazoa - 2822; Fungi - 981; Plants - 712; Viruses - 137; Other Eukaryotes - 560 (source: NCBI BLink). & (reliability: 1354.0) & (original description: no original description)


Gene families : OG_42_0002325 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Picea release: MA_10426519g0010
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Sobic.007G200600.1 No alias component *(SERRATE) of DCL1-HYL1 miRNA biogenesis complex 0.02 Orthogroups_2024-Update
evm.model.tig00001214.5 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007042 SERRATE/Ars2_C 449 580
IPR021933 SERRATE/Ars2_N 199 280
No external refs found!