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  5. MA_10426614g0020

MA_10426614g0020


Description : (at5g59720 : 176.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27880|hsp12_medsa : 171.0) 18.2 kDa class I heat shock protein - Medicago sativa (Alfalfa) & (reliability: 352.0) & (original description: no original description)


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10426614g0020
Cluster HCCA clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G200300 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Kfl00404_0080 kfl00404_0080_v1.1 (at1g53540 : 122.0) HSP20-like chaperones superfamily... 0.02 Orthogroups_2024-Update
PSME_00024444-RA No alias (at1g54050 : 112.0) HSP20-like chaperones superfamily... 0.04 Orthogroups_2024-Update
PSME_00036171-RA No alias (p46516|hsp21_helan : 132.0) 17.9 kDa class II heat... 0.02 Orthogroups_2024-Update
PSME_00055967-RA No alias (p19242|hsp21_pea : 100.0) 17.1 kDa class II heat shock... 0.02 Orthogroups_2024-Update
Potri.006G223900 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
Potri.009G049800 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Pp1s11_289V6 No alias small heat-shock protein 0.03 Orthogroups_2024-Update
Pp1s372_62V6 No alias 18.5 kDa class I heat shock protein (HSP 18.5) [Glycine max] 0.03 Orthogroups_2024-Update
Pp1s85_11V6 No alias 18.5 kDa class I heat shock protein (HSP 18.5) [Glycine max] 0.04 Orthogroups_2024-Update
Sobic.004G092700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G093500.1 No alias class-ER small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.010G104300.1 No alias class-PX small heat-shock-responsive protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 54 151
No external refs found!