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  5. MA_10426662g0010

MA_10426662g0010


Description : (at3g19960 : 245.0) member of Myosin-like proteins; myosin 1 (ATM1); CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G50360.1); Has 7421 Blast hits to 6650 proteins in 772 species: Archae - 0; Bacteria - 19; Metazoa - 4930; Fungi - 705; Plants - 652; Viruses - 1; Other Eukaryotes - 1114 (source: NCBI BLink). & (reliability: 490.0) & (original description: no original description)


Gene families : OG_42_0000130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10426662g0010
Cluster HCCA clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
PSME_00022093-RA No alias (at1g17580 : 308.0) Encodes a member of the type XI... 0.04 Orthogroups_2024-Update
PSME_00028363-RA No alias (at5g20490 : 238.0) Encodes a member of the type XI... 0.05 Orthogroups_2024-Update
Potri.002G041800 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Solyc08g061500 No alias myosin (AHRD V3.3 *** AT4G33200.1) 0.03 Orthogroups_2024-Update
Sopen06g003300 No alias Myosin head (motor domain) 0.02 Orthogroups_2024-Update
evm.model.tig00021108.19 No alias (at1g04600 : 533.0) member of Myosin-like proteins;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 94 109
IPR000048 IQ_motif_EF-hand-BS 43 61
No external refs found!