1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10427076g0010

MA_10427076g0010


Description : (at3g05680 : 188.0) embryo defective 2016 (EMB2016); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown. & (reliability: 376.0) & (original description: no original description)


Gene families : OG_42_0006772 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10427076g0010
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Bradi1g41947 No alias embryo defective 2016 0.07 Orthogroups_2024-Update
Glyma.02G195600 No alias embryo defective 2016 0.04 Orthogroups_2024-Update
PSME_00003628-RA No alias (at3g05680 : 993.0) embryo defective 2016 (EMB2016);... 0.07 Orthogroups_2024-Update
Sobic.001G191700.1 No alias regulatory component *(VIR) of adenosine... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!