1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g095180

Solyc01g095180


Description : RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1)


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g095180
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_08432 No alias ring-h2 finger protein atl70 0.03 Orthogroups_2024-Update
A4A49_15530 No alias ring-h2 finger protein atl54 0.03 Orthogroups_2024-Update
A4A49_18116 No alias ring-h2 finger protein atl78 0.04 Orthogroups_2024-Update
Bradi3g52160 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g19490 No alias RING-H2 finger A3A 0.04 Orthogroups_2024-Update
Glyma.17G068200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G087720.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.003G147301.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc02g082420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) 0.03 Orthogroups_2024-Update
Solyc07g053420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G42360.1) 0.04 Orthogroups_2024-Update
Solyc11g006450 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 189 231
No external refs found!