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  5. Solyc10g009340

Solyc10g009340


Description : Calcium-binding family protein (AHRD V3.3 *** B9I910_POPTR)


Gene families : OG_42_0000762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g009340
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
A4A49_09797 No alias calcium-binding protein pbp1 0.03 Orthogroups_2024-Update
AC225718.2_FG006 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
At4g27280 No alias Calcium-binding protein KRP1... 0.02 Orthogroups_2024-Update
Glyma.12G103600 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
LOC_Os06g46950 No alias EF hand family protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G411800 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 45 96
No external refs found!