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  5. Solyc10g009640

Solyc10g009640


Description : Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g009640
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
115497 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
125443 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
At5g51470 No alias Auxin-responsive GH3 family protein... 0.02 Orthogroups_2024-Update
HORVU3Hr1G077360.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
LOC_Os01g57610 No alias OsGH3.1 - Probable indole-3-acetic acid-amido... 0.02 Orthogroups_2024-Update
PSME_00047176-RA No alias (at2g14960 : 265.0) encodes a protein similar to... 0.01 Orthogroups_2024-Update
Solyc10g009610 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.04 Orthogroups_2024-Update
Solyc10g009620 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.03 Orthogroups_2024-Update
Solyc10g011660 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.02 Orthogroups_2024-Update
Sopen07g028470 No alias GH3 auxin-responsive promoter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 18 553
No external refs found!