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Description : (at4g20090 : 598.0) embryo defective 1025 (EMB1025); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G64320.1); Has 50788 Blast hits to 13881 proteins in 299 species: Archae - 2; Bacteria - 48; Metazoa - 729; Fungi - 797; Plants - 47488; Viruses - 0; Other Eukaryotes - 1724 (source: NCBI BLink). & (q76c99|rf1_orysa : 295.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1196.0) & (original description: no original description)
Gene families : OG_42_0009642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009642_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10431376g0010 | |
| Cluster | HCCA clusters: Cluster_112 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
| BP | GO:0006260 | DNA replication | IEP | Predicted GO |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 586 | 616 |
| IPR002885 | Pentatricopeptide_repeat | 201 | 233 |
| IPR002885 | Pentatricopeptide_repeat | 621 | 642 |
| IPR002885 | Pentatricopeptide_repeat | 141 | 163 |
| IPR002885 | Pentatricopeptide_repeat | 309 | 358 |
| IPR002885 | Pentatricopeptide_repeat | 449 | 497 |
| IPR002885 | Pentatricopeptide_repeat | 239 | 288 |
| IPR002885 | Pentatricopeptide_repeat | 519 | 568 |
| IPR002885 | Pentatricopeptide_repeat | 379 | 428 |
| No external refs found! |