Description : (at5g03240 : 437.0) encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments.; polyubiquitin 3 (UBQ3); INVOLVED IN: protein modification process, response to UV-B, response to light stimulus, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 26684 Blast hits to 7218 proteins in 726 species: Archae - 0; Bacteria - 80; Metazoa - 12490; Fungi - 3021; Plants - 5505; Viruses - 651; Other Eukaryotes - 4937 (source: NCBI BLink). & (p69326|ubiq_wheat : 150.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 874.0) & (original description: no original description)
Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10431748g0020 | |
Cluster | HCCA clusters: Cluster_130 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.C02747.1 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
Brara.D00067.1 | No alias | component *(eS31) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G110900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Kfl00325_0060 | kfl00325_0060_v1.1 | (at5g42220 : 100.0) Ubiquitin-like superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
Potri.004G094100 | No alias | polyubiquitin 10 | 0.02 | Orthogroups_2024-Update | |
Pp1s17_265V6 | No alias | polyubiquitin containing 7 ubiquitin monomers | 0.03 | Orthogroups_2024-Update | |
Seita.3G398300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.010G223600.1 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
Sobic.010G225300.2 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
Sobic.010G239500.6 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
BP | GO:0009415 | response to water | IEP | Predicted GO |
MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Predicted GO |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
BP | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient | IEP | Predicted GO |
BP | GO:0015991 | ATP hydrolysis coupled proton transport | IEP | Predicted GO |
MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
MF | GO:0016160 | amylase activity | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Predicted GO |
BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
BP | GO:0090662 | ATP hydrolysis coupled transmembrane transport | IEP | Predicted GO |
BP | GO:0098655 | cation transmembrane transport | IEP | Predicted GO |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predicted GO |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predicted GO |
BP | GO:0099131 | ATP hydrolysis coupled ion transmembrane transport | IEP | Predicted GO |
BP | GO:0099132 | ATP hydrolysis coupled cation transmembrane transport | IEP | Predicted GO |
BP | GO:1902600 | proton transmembrane transport | IEP | Predicted GO |
No external refs found! |