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  5. MA_10432544g0010

MA_10432544g0010


Description : (at5g57710 : 479.0) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-2 (InterPro:IPR013093); BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G30350.1); Has 16657 Blast hits to 15152 proteins in 2785 species: Archae - 23; Bacteria - 13282; Metazoa - 28; Fungi - 336; Plants - 548; Viruses - 0; Other Eukaryotes - 2440 (source: NCBI BLink). & (q6f2y7|hs101_orysa : 83.2) Heat shock protein 101 - Oryza sativa (Rice) & (reliability: 958.0) & (original description: no original description)


Gene families : OG_42_0004277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10432544g0010
Cluster HCCA clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G040890 No alias Double Clp-N motif-containing P-loop nucleoside... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 827 964
No external refs found!