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  5. Solyc10g012270

Solyc10g012270


Description : Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A072TZ92_MEDTR)


Gene families : OG_42_0001511 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g012270
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G053764 No alias ubiquitin-conjugating enzyme 5 0.03 Orthogroups_2024-Update
GRMZM2G146374 No alias ubiquitin-conjugating enzyme 5 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 11 118
No external refs found!