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  5. MA_10433728g0020

MA_10433728g0020


Description : (at2g48110 : 228.0) Encodes a novel protein of unknown function with homologs in non-seed plants. Sequence analysis predicts membrane spanning domains and a putative protein-protein interaction domain. Semi-dominant mutations display defects in phenylpropanoid accumulation suggesting a role in phenylpropanoid metabolism.; REDUCED EPIDERMAL FLUORESCENCE 4 (REF4); BEST Arabidopsis thaliana protein match is: REF4-related 1 (TAIR:AT3G23590.1); Has 140 Blast hits to 138 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 416.0) & (original description: no original description)


Gene families : OG_42_0002332 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002332_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10433728g0020
Cluster HCCA clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
A4A49_09657 No alias mediator of rna polymerase ii transcription subunit 33a 0.03 Orthogroups_2024-Update
Kfl00065_0340 kfl00065_0340_v1.1 (at3g23590 : 221.0) REF4-related 1 (RFR1); BEST... 0.02 Orthogroups_2024-Update
Potri.016G142500 No alias REF4-related 1 0.03 Orthogroups_2024-Update
Pp1s106_135V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.3G290800.1 No alias component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!