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  5. MA_10433868g0010

MA_10433868g0010


Description : (at5g15710 : 118.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), F-box associated interaction domain (InterPro:IPR017451), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G30950.1); Has 1386 Blast hits to 1382 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1386; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 236.0) & (original description: no original description)


Gene families : OG_42_0001085 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10433868g0010
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
MA_10436145g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_132560g0010 No alias (at5g15710 : 81.6) Galactose oxidase/kelch repeat... 0.03 Orthogroups_2024-Update
PSME_00017352-RA No alias (at5g15710 : 119.0) Galactose oxidase/kelch repeat... 0.03 Orthogroups_2024-Update
PSME_00051473-RA No alias (at5g15710 : 85.5) Galactose oxidase/kelch repeat... 0.01 Orthogroups_2024-Update
Pp1s111_44V6 No alias contains EST C28646(C61919) similar to Arabidopsis... 0.03 Orthogroups_2024-Update
Pp1s123_69V6 No alias F14F8.90; F-box protein family [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 14 50
No external refs found!