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  5. MA_10434152g0010

MA_10434152g0010


Description : (at4g18370 : 166.0) Encodes DEG5. Forms a hexamer with DEG8 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII).; DEGP protease 5 (DEG5); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: photosystem II repair, proteolysis; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 15121 Blast hits to 15118 proteins in 2570 species: Archae - 102; Bacteria - 10211; Metazoa - 307; Fungi - 110; Plants - 358; Viruses - 2; Other Eukaryotes - 4031 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description)


Gene families : OG_42_0001414 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001414_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Picea release: MA_10434152g0010
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Potri.004G129200 No alias Trypsin family protein with PDZ domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!