Coexpression cluster: Cluster_3 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005198 structural molecule activity 6.43% (9/140) 3.05 2e-06 8.3e-05
GO:0043232 intracellular non-membrane-bounded organelle 6.43% (9/140) 3.11 1e-06 8.9e-05
GO:0043228 non-membrane-bounded organelle 6.43% (9/140) 3.11 1e-06 8.9e-05
GO:1990904 ribonucleoprotein complex 6.43% (9/140) 3.06 1e-06 9.5e-05
GO:0003735 structural constituent of ribosome 6.43% (9/140) 3.17 1e-06 0.000126
GO:0005840 ribosome 6.43% (9/140) 3.22 1e-06 0.000193
GO:0043043 peptide biosynthetic process 5.71% (8/140) 3.02 7e-06 0.00028
GO:1901566 organonitrogen compound biosynthetic process 7.14% (10/140) 2.56 9e-06 0.000307
GO:0006412 translation 5.71% (8/140) 3.03 7e-06 0.000307
GO:0043604 amide biosynthetic process 5.71% (8/140) 2.95 1e-05 0.000316
GO:0006518 peptide metabolic process 5.71% (8/140) 2.92 1.1e-05 0.000333
GO:0044444 cytoplasmic part 7.14% (10/140) 2.49 1.3e-05 0.000351
GO:0044271 cellular nitrogen compound biosynthetic process 7.14% (10/140) 2.47 1.5e-05 0.000359
GO:0043603 cellular amide metabolic process 5.71% (8/140) 2.85 1.6e-05 0.000373
GO:1901567 fatty acid derivative binding 1.43% (2/140) 6.56 0.000166 0.002949
GO:0000062 fatty-acyl-CoA binding 1.43% (2/140) 6.56 0.000166 0.002949
GO:0031163 metallo-sulfur cluster assembly 1.43% (2/140) 6.56 0.000166 0.002949
GO:0016226 iron-sulfur cluster assembly 1.43% (2/140) 6.56 0.000166 0.002949
GO:0044249 cellular biosynthetic process 7.86% (11/140) 1.9 0.000196 0.003138
GO:0034645 cellular macromolecule biosynthetic process 5.71% (8/140) 2.34 0.000196 0.0033
GO:0034641 cellular nitrogen compound metabolic process 7.86% (11/140) 1.83 0.000285 0.004347
GO:0009059 macromolecule biosynthetic process 5.71% (8/140) 2.24 0.00031 0.004508
GO:1901576 organic substance biosynthetic process 7.86% (11/140) 1.8 0.000339 0.004715
GO:0043226 organelle 6.43% (9/140) 1.99 0.000484 0.005956
GO:0043229 intracellular organelle 6.43% (9/140) 1.99 0.000484 0.005956
GO:0005622 intracellular 3.57% (5/140) 2.96 0.000471 0.006281
GO:0005575 cellular_component 15.71% (22/140) 1.1 0.000539 0.006385
GO:0032991 protein-containing complex 7.14% (10/140) 1.82 0.00059 0.006739
GO:0009058 biosynthetic process 7.86% (11/140) 1.67 0.000734 0.008094
GO:0033218 amide binding 1.43% (2/140) 5.56 0.000764 0.008144
GO:0044424 intracellular part 8.57% (12/140) 1.53 0.000952 0.009824
GO:0006081 cellular aldehyde metabolic process 1.43% (2/140) 5.1 0.001484 0.014842
GO:1901681 sulfur compound binding 1.43% (2/140) 4.86 0.00209 0.02027
GO:0044464 cell part 8.57% (12/140) 1.35 0.0027 0.025409
GO:0046184 aldehyde biosynthetic process 0.71% (1/140) 7.56 0.005296 0.034584
GO:0042819 vitamin B6 biosynthetic process 0.71% (1/140) 7.56 0.005296 0.034584
GO:0004359 glutaminase activity 0.71% (1/140) 7.56 0.005296 0.034584
GO:0042822 pyridoxal phosphate metabolic process 0.71% (1/140) 7.56 0.005296 0.034584
GO:0008565 protein transporter activity 0.71% (1/140) 7.56 0.005296 0.034584
GO:0042823 pyridoxal phosphate biosynthetic process 0.71% (1/140) 7.56 0.005296 0.034584
GO:0032955 regulation of division septum assembly 0.71% (1/140) 7.56 0.005296 0.034584
GO:0032465 regulation of cytokinesis 0.71% (1/140) 7.56 0.005296 0.034584
GO:0051302 regulation of cell division 0.71% (1/140) 7.56 0.005296 0.034584
GO:0032954 regulation of cytokinetic process 0.71% (1/140) 7.56 0.005296 0.034584
GO:0042816 vitamin B6 metabolic process 0.71% (1/140) 7.56 0.005296 0.034584
GO:1901891 regulation of cell septum assembly 0.71% (1/140) 7.56 0.005296 0.034584
GO:0090407 organophosphate biosynthetic process 2.14% (3/140) 3.06 0.005666 0.036264
GO:0044425 membrane part 6.43% (9/140) 1.53 0.00423 0.038677
GO:0016021 integral component of membrane 5.71% (8/140) 1.63 0.004564 0.040566
GO:0051536 iron-sulfur cluster binding 1.43% (2/140) 3.98 0.00712 0.043815
GO:0051540 metal cluster binding 1.43% (2/140) 3.98 0.00712 0.043815
GO:0031224 intrinsic component of membrane 5.71% (8/140) 1.6 0.005205 0.045017
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_11 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_43 0.03 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_76 0.027 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_37 0.033 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_57 0.026 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_63 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_68 0.019 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_71 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_57 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_65 0.027 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_104 0.027 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_213 0.021 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_31 0.028 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_147 0.035 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_20 0.026 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_98 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_15 0.027 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_37 0.034 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_136 0.023 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_210 0.027 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_7 0.047 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_115 0.044 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_133 0.03 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_193 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_206 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_40 0.028 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_41 0.036 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_53 0.027 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_77 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_143 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_163 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_187 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_13 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_24 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_79 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_156 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_384 0.037 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_389 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_53 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_86 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_88 0.035 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_119 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_145 0.027 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_56 0.033 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0004 0.03 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0040 0.031 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0112 0.023 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0127 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0030 0.043 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0050 0.029 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0136 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_9 0.03 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_23 0.041 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_72 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_133 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_361 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_38 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_45 0.04 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_74 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_101 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_138 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_204 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_4 0.024 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_6 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_14 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_56 0.026 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_146 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_148 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_195 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_237 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_3 0.049 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_67 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_69 0.029 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_110 0.028 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_163 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_197 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_210 0.024 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_9 0.024 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_23 0.027 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_58 0.024 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_63 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_81 0.02 Orthogroups_2024-Update Compare
Sequences (140) (download table)

InterPro Domains

GO Terms

Family Terms