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  5. MA_10434775g0010

MA_10434775g0010


Description : (at1g09880 : 299.0) Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT1G09890.1); Has 288 Blast hits to 274 proteins in 61 species: Archae - 0; Bacteria - 42; Metazoa - 0; Fungi - 85; Plants - 160; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 598.0) & (original description: no original description)


Gene families : OG_42_0000589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10434775g0010
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
PSME_00001722-RA No alias (at1g09910 : 793.0) Rhamnogalacturonate lyase family... 0.04 Orthogroups_2024-Update
Seita.3G119000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen04g030380 No alias Rhamnogalacturonate lyase family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029413 RG-lyase_II 100 173
No external refs found!