Description : (at3g22980 : 1251.0) Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink). & (o23755|ef2_betvu : 338.0) Elongation factor 2 (EF-2) - Beta vulgaris (Sugar beet) & (reliability: 2502.0) & (original description: no original description)
Gene families : OG_42_0004404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004404_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10435902g0010 | |
Cluster | HCCA clusters: Cluster_63 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Kfl00142_0070 | kfl00142_0070_v1.... | (at3g22980 : 938.0) Ribosomal protein S5/Elongation... | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g44780 | No alias | elongation factor Tu family protein, putative, expressed | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | InterProScan predictions |
MF | GO:0005525 | GTP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006298 | mismatch repair | IEP | Predicted GO |
BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Predicted GO |
BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
CC | GO:0008023 | transcription elongation factor complex | IEP | Predicted GO |
BP | GO:0008104 | protein localization | IEP | Predicted GO |
BP | GO:0015031 | protein transport | IEP | Predicted GO |
BP | GO:0015833 | peptide transport | IEP | Predicted GO |
BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
BP | GO:0016570 | histone modification | IEP | Predicted GO |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
CC | GO:0030127 | COPII vesicle coat | IEP | Predicted GO |
MF | GO:0030983 | mismatched DNA binding | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
BP | GO:0042886 | amide transport | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
BP | GO:0048193 | Golgi vesicle transport | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
No external refs found! |