Description : (at3g23590 : 785.0) REF4-related 1 (RFR1); BEST Arabidopsis thaliana protein match is: reduced epidermal fluorescence 4 (TAIR:AT2G48110.1); Has 143 Blast hits to 139 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1570.0) & (original description: no original description)
Gene families : OG_42_0002332 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002332_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10436194g0040 | |
Cluster | HCCA clusters: Cluster_59 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g17590 | No alias | REF4-related 1 | 0.04 | Orthogroups_2024-Update | |
Glyma.19G001500 | No alias | REF4-related 1 | 0.03 | Orthogroups_2024-Update | |
LOC_Os07g48350 | No alias | structural constituent of ribosome, putative, expressed | 0.02 | Orthogroups_2024-Update | |
Mp1g09470.1 | No alias | component MED5/MED24/MED33 of tail module of MEDIATOR... | 0.02 | Orthogroups_2024-Update | |
Sobic.002G419800.1 | No alias | component *(MED5/MED24/MED33) of tail module of MEDIATOR... | 0.04 | Orthogroups_2024-Update | |
Sopen09g026460 | No alias | hypothetical protein | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Predicted GO |
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Predicted GO |
MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
MF | GO:0003714 | transcription corepressor activity | IEP | Predicted GO |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Predicted GO |
MF | GO:0005215 | transporter activity | IEP | Predicted GO |
MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Predicted GO |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0006555 | methionine metabolic process | IEP | Predicted GO |
BP | GO:0006810 | transport | IEP | Predicted GO |
BP | GO:0006812 | cation transport | IEP | Predicted GO |
BP | GO:0006813 | potassium ion transport | IEP | Predicted GO |
BP | GO:0007275 | multicellular organism development | IEP | Predicted GO |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predicted GO |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
BP | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient | IEP | Predicted GO |
BP | GO:0015991 | ATP hydrolysis coupled proton transport | IEP | Predicted GO |
CC | GO:0016020 | membrane | IEP | Predicted GO |
CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predicted GO |
BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
CC | GO:0031224 | intrinsic component of membrane | IEP | Predicted GO |
BP | GO:0032501 | multicellular organismal process | IEP | Predicted GO |
BP | GO:0032502 | developmental process | IEP | Predicted GO |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Predicted GO |
CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | Predicted GO |
BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0048856 | anatomical structure development | IEP | Predicted GO |
BP | GO:0051179 | localization | IEP | Predicted GO |
BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Predicted GO |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | Predicted GO |
BP | GO:0090662 | ATP hydrolysis coupled transmembrane transport | IEP | Predicted GO |
BP | GO:0098655 | cation transmembrane transport | IEP | Predicted GO |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predicted GO |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
BP | GO:0099131 | ATP hydrolysis coupled ion transmembrane transport | IEP | Predicted GO |
BP | GO:0099132 | ATP hydrolysis coupled cation transmembrane transport | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |