Description : (at1g13260 : 145.0) Encodes an AP2/B3 domain transcription factor which is upregulated in response to low temperature. It contains a B3 DNA binding domain. It has circadian regulation and may function as a negative growth regulator.; related to ABI3/VP1 1 (RAV1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response DNA binding factor 3 (TAIR:AT3G25730.1); Has 6277 Blast hits to 6015 proteins in 258 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6251; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 290.0) & (original description: no original description)
Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10436315g0020 | |
Cluster | HCCA clusters: Cluster_130 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.J02597.1 | No alias | RAV/NGATHA-type transcription factor | 0.04 | Orthogroups_2024-Update | |
Glyma.19G196600 | No alias | AP2/B3-like transcriptional factor family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s63_80V6 | No alias | ap2 domain-containing transcription factor | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
BP | GO:0009309 | amine biosynthetic process | IEP | Predicted GO |
MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Predicted GO |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
MF | GO:0030410 | nicotianamine synthase activity | IEP | Predicted GO |
BP | GO:0030417 | nicotianamine metabolic process | IEP | Predicted GO |
BP | GO:0030418 | nicotianamine biosynthetic process | IEP | Predicted GO |
BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0072351 | tricarboxylic acid biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003340 | B3_DNA-bd | 100 | 165 |
No external refs found! |