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Description : (at2g47590 : 209.0) photolyase/blue light photoreceptor PHR2 (PHR2) mRNA,; photolyase/blue-light receptor 2 (PHR2); FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 3 (TAIR:AT5G24850.1); Has 4854 Blast hits to 4851 proteins in 1205 species: Archae - 82; Bacteria - 2283; Metazoa - 348; Fungi - 105; Plants - 417; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink). & (q651u1|cryd_orysa : 94.7) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (reliability: 418.0) & (original description: no original description)
Gene families : OG_42_0001991 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001991_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_10436605g0010 | |
| Cluster | HCCA clusters: Cluster_171 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| evm.model.tig00020965.70 | No alias | (q651u1|cryd_orysa : 216.0) Cryptochrome DASH,... | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00021012.26 | No alias | (at5g24850 : 151.0) Binds flavin adenine dinucleotide... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
| MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Predicted GO |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0006006 | glucose metabolic process | IEP | Predicted GO |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Predicted GO |
| BP | GO:0006094 | gluconeogenesis | IEP | Predicted GO |
| BP | GO:0006096 | glycolytic process | IEP | Predicted GO |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Predicted GO |
| BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
| BP | GO:0006757 | ATP generation from ADP | IEP | Predicted GO |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Predicted GO |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Predicted GO |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Predicted GO |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Predicted GO |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
| BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Predicted GO |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
| BP | GO:0042866 | pyruvate biosynthetic process | IEP | Predicted GO |
| BP | GO:0046031 | ADP metabolic process | IEP | Predicted GO |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Predicted GO |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Predicted GO |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |