MA_10436810g0020


Description : (at3g28345 : 992.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 723.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1984.0) & (original description: no original description)


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10436810g0020
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
169182 No alias ATP binding cassette subfamily B4 0.02 Orthogroups_2024-Update
A4A49_00814 No alias abc transporter b family member 4 0.03 Orthogroups_2024-Update
Brara.B03326.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Brara.G00386.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Brara.H03115.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Brara.I00320.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Brara.I00328.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
GRMZM2G004748 No alias P-glycoprotein 2 0.03 Orthogroups_2024-Update
GRMZM2G333183 No alias ATP binding cassette subfamily B1 0.03 Orthogroups_2024-Update
Glyma.16G078100 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G063020.3 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
LOC_Os04g40570 No alias ABC transporter, ATP-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00023263-RA No alias (q6yuu5|mdr_orysa : 1044.0) Putative multidrug... 0.06 Orthogroups_2024-Update
PSME_00023264-RA No alias (q6yuu5|mdr_orysa : 1318.0) Putative multidrug... 0.05 Orthogroups_2024-Update
PSME_00031965-RA No alias (q6yuu5|mdr_orysa : 1268.0) Putative multidrug... 0.05 Orthogroups_2024-Update
PSME_00035545-RA No alias (q6yuu5|mdr_orysa : 1259.0) Putative multidrug... 0.04 Orthogroups_2024-Update
PSME_00038380-RA No alias (q6yuu5|mdr_orysa : 1204.0) Putative multidrug... 0.08 Orthogroups_2024-Update
PSME_00039058-RA No alias (q6yuu5|mdr_orysa : 1225.0) Putative multidrug... 0.07 Orthogroups_2024-Update
Potri.014G113500 No alias P-glycoprotein 21 0.06 Orthogroups_2024-Update
Potri.018G087100 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Pp1s29_108V6 No alias multidrug pheromone mdr abc transporter family 0.02 Orthogroups_2024-Update
Pp1s391_45V6 No alias multidrug pheromone mdr abc transporter family 0.02 Orthogroups_2024-Update
Seita.5G189700.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Seita.5G283600.1 No alias subfamily ABCB transporter 0.06 Orthogroups_2024-Update
Seita.6G060200.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.003G139300.3 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Sobic.003G267700.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.006G105600.1 No alias auxin efflux transporter *(ABCB19) & subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Sobic.007G042600.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Solyc06g009290 No alias ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) 0.05 Orthogroups_2024-Update
Solyc09g008240 No alias ABC transporter B family protein (AHRD V3.3 *** G7L3V6_MEDTR) 0.02 Orthogroups_2024-Update
Sopen06g004030 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update
Sopen06g029310 No alias ABC transporter 0.02 Orthogroups_2024-Update
Sopen09g003060 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 920 997
IPR011527 ABC1_TM_dom 54 286
IPR011527 ABC1_TM_dom 1301 1425
IPR011527 ABC1_TM_dom 1430 1538
IPR011527 ABC1_TM_dom 660 840
IPR003439 ABC_transporter-like 1618 1662
IPR003439 ABC_transporter-like 1006 1154
IPR003439 ABC_transporter-like 366 494
No external refs found!