MA_10605g0020

Description : (at1g68530 : 749.0) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 6 (KCS6); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 5 (TAIR:AT1G25450.1); Has 1620 Blast hits to 1616 proteins in 389 species: Archae - 0; Bacteria - 691; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 1498.0) & (original description: no original description)

Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_10605g0020
Cluster	HCCA clusters: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
231244	No alias	3-ketoacyl-CoA synthase 4	0.04	Orthogroups_2024-Update
79947	No alias	3-ketoacyl-CoA synthase 4	0.03	Orthogroups_2024-Update
A4A49_31667	No alias	3-ketoacyl-coa synthase 11	0.02	Orthogroups_2024-Update
At1g04220	No alias	3-ketoacyl-CoA synthase 2...	0.03	Orthogroups_2024-Update
Bradi2g15720	No alias	3-ketoacyl-CoA synthase 11	0.02	Orthogroups_2024-Update
Brara.H01198.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
Brara.J00238.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
GRMZM2G031790	No alias	3-ketoacyl-CoA synthase 2	0.01	Orthogroups_2024-Update
GRMZM2G164974	No alias	3-ketoacyl-CoA synthase 6	0.04	Orthogroups_2024-Update
Glyma.08G261100	No alias	3-ketoacyl-CoA synthase 6	0.04	Orthogroups_2024-Update
Glyma.10G179400	No alias	3-ketoacyl-CoA synthase 11	0.03	Orthogroups_2024-Update
HORVU1Hr1G090730.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
HORVU4Hr1G063420.2	No alias	3-ketoacyl-CoA synthase *(KCS)	0.03	Orthogroups_2024-Update
HORVU4Hr1G073840.2	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
HORVU7Hr1G006910.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
MA_10426106g0010	No alias	(at2g16280 : 194.0) Encodes KCS9, a member of the...	0.04	Orthogroups_2024-Update
PSME_00008960-RA	No alias	(at2g26640 : 707.0) Encodes KCS11, a member of the...	0.09	Orthogroups_2024-Update
PSME_00037485-RA	No alias	(at2g26250 : 756.0) epidermis-specific, encodes KCS10, a...	0.02	Orthogroups_2024-Update
Potri.002G178000	No alias	3-ketoacyl-CoA synthase 1	0.03	Orthogroups_2024-Update
Potri.010G125300	No alias	3-ketoacyl-CoA synthase 6	0.03	Orthogroups_2024-Update
Potri.014G104300	No alias	3-ketoacyl-CoA synthase 1	0.03	Orthogroups_2024-Update
Pp1s30_335V6	No alias	beta-ketoacyl-coa synthase family protein	0.02	Orthogroups_2024-Update
Pp1s8_88V6	No alias	beta-ketoacyl- synthase	0.04	Orthogroups_2024-Update
Seita.1G308900.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.05	Orthogroups_2024-Update
Seita.9G285300.1	No alias	3-ketoacyl-CoA synthase *(KCS)	0.02	Orthogroups_2024-Update
Solyc09g083050	No alias	3-ketoacyl-CoA synthase (AHRD V3.3 *** M1A6B6_SOLTU)	0.03	Orthogroups_2024-Update
Solyc12g006820	No alias	3-ketoacyl-CoA synthase (AHRD V3.3 *** M0ZKJ4_SOLTU)	0.03	Orthogroups_2024-Update
Sopen02g030550	No alias	FAE1/Type III polyketide synthase-like protein	0.02	Orthogroups_2024-Update
Sopen03g021100	No alias	FAE1/Type III polyketide synthase-like protein	0.02	Orthogroups_2024-Update
Sopen05g005020	No alias	FAE1/Type III polyketide synthase-like protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	InterProScan predictions
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
CC	GO:0005787	signal peptidase complex	IEP	Predicted GO
BP	GO:0006465	signal peptide processing	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
BP	GO:0009611	response to wounding	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
BP	GO:0016485	protein processing	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0030414	peptidase inhibitor activity	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
BP	GO:0051604	protein maturation	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:0061134	peptidase regulator activity	IEP	Predicted GO
MF	GO:0061135	endopeptidase regulator activity	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO
CC	GO:1905368	peptidase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	87	375
IPR013747	ACP_syn_III_C	390	473

External Links

No external refs found!

MA_10605g0020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation