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MA_1062g0010


Description : (at2g19580 : 247.0) Member of TETRASPANIN family; tetraspanin2 (TET2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: Tetraspanin family protein (TAIR:AT5G46700.1); Has 515 Blast hits to 513 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 494.0) & (original description: no original description)


Gene families : OG_42_0002145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_1062g0010
Cluster HCCA clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
A4A49_06649 No alias tetraspanin-2 0.03 Orthogroups_2024-Update
Brara.F03607.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.07G129100 No alias tetraspanin2 0.04 Orthogroups_2024-Update
Sobic.001G543600.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 13 250
No external refs found!