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  5. MA_106995g0010

MA_106995g0010


Description : (at1g25280 : 183.0) Member of TLP family; tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 5 (TAIR:AT1G43640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 366.0) & (original description: no original description)


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_106995g0010
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G152700 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
PSME_00046188-RA No alias (at2g47900 : 280.0) Member of TLP family; tubby like... 0.06 Orthogroups_2024-Update
Pp1s222_14V6 No alias No description available 0.07 Orthogroups_2024-Update
Sobic.004G267600.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Sopen01g047190 No alias Tub family 0.03 Orthogroups_2024-Update
Sopen09g029350 No alias Tub family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 43 96
IPR000007 Tubby_C 107 137
No external refs found!