Description : (at4g05050 : 167.0) polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene.; ubiquitin 11 (UBQ11); INVOLVED IN: protein modification process, response to salt stress, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin family protein (TAIR:AT4G02890.2). & (p69326|ubiq_wheat : 150.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 334.0) & (original description: no original description)
Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_10754g0010 | |
Cluster | HCCA clusters: Cluster_130 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_39502 | No alias | polyubiquitin 10 | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G110900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G021700.4 | No alias | UBQ ubiquitin-fold protein | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G026200.5 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
MA_7263500g0010 | No alias | (at4g02890 : 590.0) Polyubiquitin gene containing 4... | 0.04 | Orthogroups_2024-Update | |
Pp1s17_265V6 | No alias | polyubiquitin containing 7 ubiquitin monomers | 0.05 | Orthogroups_2024-Update | |
Pp1s46_189V6 | No alias | polyubiquitin | 0.02 | Orthogroups_2024-Update | |
Seita.5G081000.1 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update | |
Sobic.003G403700.1 | No alias | UBQ ubiquitin-fold protein | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
MF | GO:0003725 | double-stranded RNA binding | IEP | Predicted GO |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
BP | GO:0009415 | response to water | IEP | Predicted GO |
BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
MF | GO:0009678 | hydrogen-translocating pyrophosphatase activity | IEP | Predicted GO |
BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
BP | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient | IEP | Predicted GO |
BP | GO:0015991 | ATP hydrolysis coupled proton transport | IEP | Predicted GO |
MF | GO:0016160 | amylase activity | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Predicted GO |
BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
BP | GO:0042221 | response to chemical | IEP | Predicted GO |
BP | GO:0090662 | ATP hydrolysis coupled transmembrane transport | IEP | Predicted GO |
BP | GO:0098655 | cation transmembrane transport | IEP | Predicted GO |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predicted GO |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predicted GO |
BP | GO:0099131 | ATP hydrolysis coupled ion transmembrane transport | IEP | Predicted GO |
BP | GO:0099132 | ATP hydrolysis coupled cation transmembrane transport | IEP | Predicted GO |
BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
BP | GO:1902600 | proton transmembrane transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000626 | Ubiquitin_dom | 39 | 110 |
No external refs found! |