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  5. MA_116442g0010

MA_116442g0010


Description : (at2g27610 : 647.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (q76c99|rf1_orysa : 141.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1294.0) & (original description: no original description)


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_116442g0010
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
105729 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
115259 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
96927 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
At1g59720 No alias Pentatricopeptide repeat-containing protein At1g59720,... 0.04 Orthogroups_2024-Update
At4g13650 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Orthogroups_2024-Update
Bradi2g53450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G019689 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G030148 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G474929 No alias mitochondrial editing factor 21 0.02 Orthogroups_2024-Update
Glyma.20G154600 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 Orthogroups_2024-Update
MA_181716g0010 No alias (at3g12770 : 600.0) Encodes a pentatricopeptide repeat... 0.04 Orthogroups_2024-Update
MA_668740g0020 No alias (at3g13770 : 627.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
PSME_00006159-RA No alias (at3g46790 : 260.0) Encodes a member of a PCMP (plant... 0.04 Orthogroups_2024-Update
PSME_00022688-RA No alias (at3g46790 : 282.0) Encodes a member of a PCMP (plant... 0.03 Orthogroups_2024-Update
PSME_00057248-RA No alias (at1g11290 : 733.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
Potri.016G075000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.9G489500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G548100.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 528 574
IPR002885 Pentatricopeptide_repeat 427 474
IPR002885 Pentatricopeptide_repeat 326 373
IPR002885 Pentatricopeptide_repeat 123 169
IPR002885 Pentatricopeptide_repeat 225 272
IPR032867 DYW_dom 702 825
IPR002885 Pentatricopeptide_repeat 401 426
IPR002885 Pentatricopeptide_repeat 503 527
No external refs found!