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  5. MA_117307g0010

MA_117307g0010


Description : (at2g02480 : 259.0) STICHEL mutant shows trichomes with fewer than normal branches.; STICHEL (STI); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, ATP binding; INVOLVED IN: trichome differentiation, trichome branching; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G14460.1); Has 15360 Blast hits to 15082 proteins in 2818 species: Archae - 391; Bacteria - 8894; Metazoa - 533; Fungi - 525; Plants - 301; Viruses - 38; Other Eukaryotes - 4678 (source: NCBI BLink). & (reliability: 518.0) & (original description: no original description)


Gene families : OG_42_0005302 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_117307g0010
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Glyma.17G126600 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
Potri.012G105200 No alias AAA-type ATPase family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!