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  5. MA_120879g0010

MA_120879g0010


Description : no hits & (original description: no original description)


Gene families : OG_42_0001795 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001795_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_120879g0010
Cluster HCCA clusters: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
A4A49_07063 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_23005 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g15010 No alias Mediator of RNA polymerase II transcription subunit... 0.03 Orthogroups_2024-Update
Brara.B03036.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.F01019.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_4400g0010 No alias (at2g01300 : 83.6) unknown protein; BEST Arabidopsis... 0.05 Orthogroups_2024-Update
Potri.010G115100 No alias Function unknown 0.03 Orthogroups_2024-Update
Sobic.003G093000.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!