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Description : (at4g02750 : 496.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 992.0) & (original description: no original description)
Gene families : OG_42_0116590 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_12986g0010 | |
| Cluster | HCCA clusters: Cluster_234 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| CC | GO:0030684 | preribosome | IEP | Predicted GO |
| CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 281 | 311 |
| IPR002885 | Pentatricopeptide_repeat | 250 | 280 |
| IPR002885 | Pentatricopeptide_repeat | 390 | 415 |
| IPR002885 | Pentatricopeptide_repeat | 157 | 186 |
| IPR002885 | Pentatricopeptide_repeat | 312 | 340 |
| IPR002885 | Pentatricopeptide_repeat | 189 | 218 |
| IPR002885 | Pentatricopeptide_repeat | 491 | 514 |
| IPR002885 | Pentatricopeptide_repeat | 219 | 248 |
| IPR002885 | Pentatricopeptide_repeat | 126 | 156 |
| IPR002885 | Pentatricopeptide_repeat | 98 | 124 |
| IPR002885 | Pentatricopeptide_repeat | 22 | 70 |
| IPR002885 | Pentatricopeptide_repeat | 416 | 464 |
| No external refs found! |