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MA_13061g0010


Description : (at2g25970 : 288.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT1G33680.1); Has 68611 Blast hits to 35814 proteins in 1587 species: Archae - 63; Bacteria - 12513; Metazoa - 31065; Fungi - 9811; Plants - 6751; Viruses - 351; Other Eukaryotes - 8057 (source: NCBI BLink). & (reliability: 576.0) & (original description: no original description)


Gene families : OG_42_0001296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001296_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Picea release: MA_13061g0010
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Bradi3g13480 No alias KH domain-containing protein 0.03 Orthogroups_2024-Update
Mp3g07780.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00025892-RA No alias (at2g25970 : 293.0) KH domain-containing protein;... 0.04 Orthogroups_2024-Update
Pp1s87_162V6 No alias nucleic acid binding 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 265 332
IPR004088 KH_dom_type_1 172 237
No external refs found!