1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_140260g0010

MA_140260g0010


Description : (at1g54130 : 680.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (reliability: 1360.0) & (original description: no original description)


Gene families : OG_42_0003311 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003311_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_140260g0010
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cre03.g159800 No alias RELA/SPOT homolog 3 0.02 Orthogroups_2024-Update
GRMZM2G021074 No alias RELA/SPOT homolog 3 0.03 Orthogroups_2024-Update
LOC_Os07g42160 No alias HD domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00004742-RA No alias (at3g14050 : 738.0) RELA/SPOT homolog 2 (RSH2); CONTAINS... 0.04 Orthogroups_2024-Update
Potri.001G168200 No alias RELA/SPOT homolog 3 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003607 HD/PDEase_dom 202 357
IPR007685 RelA_SpoT 415 525
No external refs found!