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MA_1420253g0010


Description : (at5g03240 : 155.0) encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments.; polyubiquitin 3 (UBQ3); INVOLVED IN: protein modification process, response to UV-B, response to light stimulus, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 26684 Blast hits to 7218 proteins in 726 species: Archae - 0; Bacteria - 80; Metazoa - 12490; Fungi - 3021; Plants - 5505; Viruses - 651; Other Eukaryotes - 4937 (source: NCBI BLink). & (p0c033|ubl1_orysa : 83.6) Ubiquitin-like protein 1 - Oryza sativa (Rice) & (reliability: 310.0) & (original description: no original description)


Gene families : OG_42_0116739 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_1420253g0010
Cluster HCCA clusters: Cluster_130


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 1 38
IPR000626 Ubiquitin_dom 43 78
No external refs found!