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  5. MA_17715g0010

MA_17715g0010


Description : "(at1g66160 : 253.0) ""CYS, MET, PRO, and GLY protein 1"" (CMPG1); FUNCTIONS IN: binding; INVOLVED IN: response to chitin; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G37490.1); Has 1454 Blast hits to 1441 proteins in 68 species: Archae - 0; Bacteria - 10; Metazoa - 52; Fungi - 8; Plants - 1378; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (q64ha9|spl11_orysa : 134.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 506.0) & (original description: no original description)"


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_17715g0010
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Bradi3g45200 No alias plant U-box 23 0.02 Orthogroups_2024-Update
Bradi3g45380 No alias plant U-box 25 0.02 Orthogroups_2024-Update
Brara.C01808.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C04418.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Glyma.11G178046 No alias plant U-box 24 0.02 Orthogroups_2024-Update
HORVU0Hr1G003810.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os02g46500 No alias U-box, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00028678-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00056652-RA No alias (at2g35930 : 195.0) Encodes a cytoplasmically localized... 0.04 Orthogroups_2024-Update
Potri.016G069400 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Seita.7G104100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G293600.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc04g071030 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006808 regulation of nitrogen utilization IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 12 83
No external refs found!