Description : (at3g12770 : 580.0) Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.; mitochondrial editing factor 22 (MEF22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 43523 Blast hits to 14475 proteins in 290 species: Archae - 0; Bacteria - 15; Metazoa - 148; Fungi - 158; Plants - 42447; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1050.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_18165g0010 | |
Cluster | HCCA clusters: Cluster_252 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g05610 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi1g59070 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
Bradi1g72290 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi2g55230 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.F01067.1 | No alias | RNA editing factor *(ECB2/VAC1) | 0.02 | Orthogroups_2024-Update | |
GRMZM2G153275 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G154743 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.15G273200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G047290.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g50280 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_107356g0010 | No alias | (at3g23330 : 545.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
MA_126037g0020 | No alias | (at4g02750 : 474.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
MA_724726g0010 | No alias | (at1g11290 : 611.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
PSME_00001719-RA | No alias | (at4g18750 : 701.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00003163-RA | No alias | (at3g23330 : 192.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
PSME_00011507-RA | No alias | (at2g27610 : 676.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00025196-RA | No alias | (at3g03580 : 681.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00052953-RA | No alias | (at4g13650 : 635.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
Seita.1G205700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.1G290500.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.4G225800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.010G232700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sopen06g035950 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen11g001910 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen11g024580 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
No external refs found! |