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Description : (at3g09040 : 399.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 73401 Blast hits to 14698 proteins in 289 species: Archae - 0; Bacteria - 19; Metazoa - 251; Fungi - 280; Plants - 71776; Viruses - 0; Other Eukaryotes - 1075 (source: NCBI BLink). & (q76c99|rf1_orysa : 127.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 798.0) & (original description: no original description)
Gene families : OG_42_0022266 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_192667g0010 | |
| Cluster | HCCA clusters: Cluster_108 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 285 | 332 |
| IPR002885 | Pentatricopeptide_repeat | 153 | 200 |
| IPR002885 | Pentatricopeptide_repeat | 570 | 618 |
| IPR002885 | Pentatricopeptide_repeat | 672 | 719 |
| IPR002885 | Pentatricopeptide_repeat | 386 | 432 |
| IPR002885 | Pentatricopeptide_repeat | 740 | 768 |
| IPR002885 | Pentatricopeptide_repeat | 117 | 148 |
| IPR002885 | Pentatricopeptide_repeat | 490 | 519 |
| IPR002885 | Pentatricopeptide_repeat | 461 | 484 |
| No external refs found! |