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  5. MA_196124g0010

MA_196124g0010


Description : (at3g25210 : 306.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 612.0) & (original description: no original description)


Gene families : OG_42_0004208 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_196124g0010
Cluster HCCA clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Sobic.010G066400.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 183 227
IPR002885 Pentatricopeptide_repeat 258 306
IPR002885 Pentatricopeptide_repeat 363 410
IPR002885 Pentatricopeptide_repeat 332 360
No external refs found!