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  5. MA_202094g0010

MA_202094g0010


Description : (q71v09|h4_capan : 152.0) Histone H4 (CaH4) - Capsicum annuum (Bell pepper) & (at5g59970 : 151.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 302.0) & (original description: no original description)


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_202094g0010
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
Bradi5g19350 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g271300 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g274300 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g276650 No alias histone H4 0.02 Orthogroups_2024-Update
Cre12.g505450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506350 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre17.g709100 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G073680.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU2Hr1G093680.3 No alias histone *(H4) 0.04 Orthogroups_2024-Update
MA_38882g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.05 Orthogroups_2024-Update
Seita.2G301400.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
Sobic.009G167500.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Sopen06g032260 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!