MA_205355g0010

Description : (at5g64950 : 101.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)

Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_205355g0010
Cluster	HCCA clusters: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
At1g62010	No alias	F8K4.20 protein [Source:UniProtKB/TrEMBL;Acc:O80705]	0.06	Orthogroups_2024-Update
At5g64950	No alias	Emb [Source:UniProtKB/TrEMBL;Acc:Q9LV83]	0.03	Orthogroups_2024-Update
Bradi4g23227	No alias	Mitochondrial transcription termination factor family protein	0.05	Orthogroups_2024-Update
Glyma.08G107000	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Glyma.15G153300	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G056910.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os01g27690	No alias	expressed protein	0.02	Orthogroups_2024-Update
MA_14049g0010	No alias	(at1g62085 : 95.1) Mitochondrial transcription...	0.05	Orthogroups_2024-Update
MA_593288g0010	No alias	(at1g79220 : 104.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
MA_760114g0010	No alias	(at5g64950 : 80.1) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
Mp1g21970.1	No alias	transcription factor (mTERF)	0.02	Orthogroups_2024-Update
PSME_00008734-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00020293-RA	No alias	(at5g23930 : 110.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00048595-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00056194-RA	No alias	(at5g64950 : 106.0) Mitochondrial transcription...	0.05	Orthogroups_2024-Update
Pp1s219_66V6	No alias	No description available	0.03	Orthogroups_2024-Update
Seita.1G321500.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
Solyc04g072490	No alias	Epidermal patterning factor (AHRD V3.3 *** A0A072V8D7_MEDTR)	0.03	Orthogroups_2024-Update
Sopen04g028720	No alias	mTERF	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0006825	copper ion transport	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0009250	glucan biosynthetic process	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
BP	GO:0035434	copper ion transmembrane transport	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0051273	beta-glucan metabolic process	IEP	Predicted GO
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003690	MTERF	16	224

External Links

No external refs found!

MA_205355g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation