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  5. MA_20537g0010

MA_20537g0010


Description : (at1g02065 : 148.0) Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.; squamosa promoter binding protein-like 8 (SPL8); CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 2 (TAIR:AT5G43270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o04003|lg1_maize : 134.0) LIGULELESS1 protein - Zea mays (Maize) & (reliability: 296.0) & (original description: no original description)


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_20537g0010
Cluster HCCA clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
A4A49_22524 No alias squamosa promoter-binding-like protein 6 0.05 Orthogroups_2024-Update
At5g43270 No alias Squamosa promoter-binding-like protein 2... 0.03 Orthogroups_2024-Update
Glyma.07G109600 No alias squamosa promoter binding protein-like 8 0.04 Orthogroups_2024-Update
Potri.002G142200 No alias squamosa promoter binding protein-like 8 0.02 Orthogroups_2024-Update
Potri.008G097900 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Solyc02g077920 No alias Colorless non-ripening 0.03 Orthogroups_2024-Update
Sopen03g033930 No alias SBP domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 152 225
No external refs found!