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  5. MA_208864g0010

MA_208864g0010


Description : (at5g08420 : 125.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); Has 2263 Blast hits to 1799 proteins in 332 species: Archae - 149; Bacteria - 48; Metazoa - 634; Fungi - 309; Plants - 96; Viruses - 0; Other Eukaryotes - 1027 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description)


Gene families : OG_42_0005655 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_208864g0010
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Kfl00636_0020 kfl00636_0020_v1.1 (at5g08420 : 387.0) RNA-binding KH domain-containing... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
CC GO:0030173 integral component of Golgi membrane IEP Predicted GO
CC GO:0031228 intrinsic component of Golgi membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!