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Description : (at5g59970 : 162.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p62788|h4_pea : 162.0) Histone H4 - Pisum sativum (Garden pea) & (reliability: 324.0) & (original description: no original description)
Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_234535g0010 | |
| Cluster | HCCA clusters: Cluster_168 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| HORVU6Hr1G011710.1 | No alias | histone *(H4) | 0.05 | Orthogroups_2024-Update | |
| Pp1s259_63V6 | No alias | histone h4 | 0.03 | Orthogroups_2024-Update | |
| Solyc04g011390 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.03 | Orthogroups_2024-Update | |
| Solyc05g054610 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.02 | Orthogroups_2024-Update | |
| Solyc06g075930 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.02 | Orthogroups_2024-Update | |
| Solyc06g075960 | No alias | histone H4 (AHRD V3.3 *** AT2G28740.1) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
| BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
| BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR035425 | CENP-T/H4_C | 36 | 96 |
| No external refs found! |