Solyc10g054420

Description : PsbP-like protein 2 (AHRD V3.3 *** A0A061FNQ0_THECC)

Gene families : OG_42_0003179 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003179_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc10g054420
Cluster	HCCA clusters: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g66296	No alias	PsbP-like protein 2	0.02	Orthogroups_2024-Update
Bradi1g77047	No alias	PsbP-like protein 1	0.03	Orthogroups_2024-Update
Kfl00496_0080	kfl00496_0080_v1.1	(at3g55330 : 177.0) PsbP-like protein 1 (PPL1);...	0.02	Orthogroups_2024-Update
Seita.9G449200.1	No alias	component *(PnsL1) of NDH lumen subcomplex L	0.02	Orthogroups_2024-Update
Sobic.001G415400.1	No alias	component *(PnsL1) of NDH lumen subcomplex L	0.02	Orthogroups_2024-Update
Sopen03g034010	No alias	PsbP	0.04	Orthogroups_2024-Update
Sopen10g024330	No alias	PsbP	0.04	Orthogroups_2024-Update
evm.model.tig00020554.147	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	InterProScan predictions
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	InterProScan predictions
CC	GO:0019898	extrinsic component of membrane	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005886	plasma membrane	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0006771	riboflavin metabolic process	IEP	Predicted GO
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	Predicted GO
MF	GO:0008987	quinolinate synthetase A activity	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0009231	riboflavin biosynthetic process	IEP	Predicted GO
BP	GO:0009435	NAD biosynthetic process	IEP	Predicted GO
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Predicted GO
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predicted GO
BP	GO:0019674	NAD metabolic process	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predicted GO
MF	GO:2001070	starch binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002683	PsbP	76	224

External Links

No external refs found!