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  5. Solyc10g054530

Solyc10g054530


Description : FAD-binding Berberine family protein, putative (AHRD V3.3 *-* A0A061G791_THECC)


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g054530
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
A4A49_11752 No alias flavin-dependent oxidoreductase fox5 0.03 Orthogroups_2024-Update
A4A49_16717 No alias reticuline oxidase-like protein 0.03 Orthogroups_2024-Update
GRMZM2G348846 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.05G122000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.15G132900 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
LOC_Os01g18230 No alias FAD-linked oxidoreductase protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g35650 No alias reticuline oxidase-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g21690 No alias EDA28/MEE23, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
Potri.001G440700 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Potri.001G459100 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G162666 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Seita.6G216800.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 18 62
No external refs found!